STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DkgAOxidoreductase, aldo/keto reductase family protein; COG: COG0656; Pfam: PF00248; InterPro: IPR001395. (273 aa)    
Predicted Functional Partners:
yqhD
Alcohol dehydrogenase, iron-dependent; COG: COG1979; Pfam: PF00465; InterPro: IPR001670.
  
  
 0.674
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.663
YhdN
Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395.
 
 
 0.588
nfsA
Nitroreductase family protein; COG: COG0778; Pfam: PF00881; InterPro: IPR000415; Belongs to the flavin oxidoreductase frp family.
  
    0.559
mocA
Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395.
 
 
 0.545
ftsZ2
PrkA AAA domain protein; COG: COG2766; Pfam: PF08298,PF06798; InterPro: IPR013153.
   
    0.543
ElaB_1
Hypothetical protein; COG: COG4575; Pfam: PF05957; InterPro: IPR010279.
   
    0.502
YdbC_2
Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395.
 
 
 0.498
YghZ_1
Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395.
 
 
 0.488
IolS_2
Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395.
 
 
 0.484
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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