STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase; COG: COG0189; Pfam: PF02951,PF02955; InterPro: IPR006284; Belongs to the prokaryotic GSH synthase family. (316 aa)    
Predicted Functional Partners:
gshA
Glutamate--cysteine ligase; COG: COG2918; Pfam: PF04262; InterPro: IPR006334; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
 
 
 0.949
ahp
Glutaredoxin-family domain protein; COG: COG0678; Pfam: PF08534,PF00462; InterPro: IPR012335.
 
  
 0.947
gor
Glutathione-disulfide reductase; COG: COG1249; Pfam: PF07992,PF00070,PF02852; InterPro: IPR006322.
     
 0.934
pepA
Cytosol aminopeptidase family, catalytic domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.926
pepB
Cytosol aminopeptidase family, catalytic domain protein; Probably plays an important role in intracellular peptide degradation.
   
 
 0.926
yfcF
Glutathione S-transferase, N-terminal domain protein; COG: COG0625; Pfam: PF02798; InterPro: IPR012335.
 
  
 0.921
gst3
Glutathione S-transferase, C-terminal domain protein; COG: COG0625; Pfam: PF02798,PF00043; InterPro: IPR010987.
 
  
 0.921
gst5
Glutathione S-transferase, C-terminal domain protein; COG: COG0625; Pfam: PF02798,PF00043; InterPro: IPR010987; Belongs to the GST superfamily.
 
  
 0.917
gpxA
Glutathione peroxidase; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
    
 0.917
ggt
Gamma-glutamyltransferase; COG: COG0405; Pfam: PF01019; InterPro: IPR000101.
    
 0.915
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.