STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuDPeriplasmic binding protein; COG: COG0614; Pfam: PF01497; InterPro: IPR002491. (282 aa)    
Predicted Functional Partners:
fhuB
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.998
fhuC
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
 0.989
fhuA
TonB-dependent siderophore receptor; COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR010105.
 
  
 0.874
fhuC2
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
 
 0.730
fepD
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.694
yojI
Cyclic peptide transporter; COG: COG4615; Pfam: PF00005; InterPro: IPR005898.
 
    0.668
hemU
Gram-positive signal peptide protein, YSIRK family; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.661
btuC
Iron chelate uptake ABC transporter, FeCT family, permease protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
   
 
 0.643
HmuV_1
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
 
 0.628
FeuC
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.615
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.