STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celC2PTS system, Lactose/Cellobiose specific IIA subunit; COG: COG1447; Pfam: PF02255; InterPro: IPR003188. (118 aa)    
Predicted Functional Partners:
GmuB
PTS system, Lactose/Cellobiose specific IIB subunit; COG: COG1440; Pfam: PF02302; InterPro: IPR003501.
 
 
 0.972
licC
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.951
celA
PTS system, Lactose/Cellobiose specific IIB subunit; COG: COG1440; Pfam: PF02302; InterPro: IPR003501.
 
 
 0.945
celA2
PTS system, Lactose/Cellobiose specific IIB subunit; COG: COG1440; Pfam: PF02302; InterPro: IPR003501.
 
 
 0.945
chbC
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.901
chbC2
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.901
celH
Glycosyl hydrolase, family 1; COG: COG2723; Pfam: PF00232; InterPro: IPR001360; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.790
chbF
Family 4 glycosyl hydrolase; COG: COG1486; Pfam: PF02056; InterPro: IPR001088.
 
  
 0.682
manX
PTS system, mannose/fructose/sorbose family, IIB component; COG: COG3444; Pfam: PF03610,PF03830; InterPro: IPR004720.
  
  
 0.625
ptsH
Phosphocarrier protein HPr; COG: COG1925; Pfam: PF00381; InterPro: IPR000032.
   
   0.618
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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