STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadCTranscriptional regulatory protein, C-terminal domain protein; COG: COG3710; Pfam: PF00486; InterPro: IPR011991. (515 aa)    
Predicted Functional Partners:
adiC
Transporter, basic amino acid/polyamine antiporter (APA) family; COG: COG0531; Pfam: PF00324; InterPro: IPR002293.
 
   
 0.808
EFE97103.1
Phage tail fiber repeat protein; COG: COG5301; Pfam: PF03406,PF07484; InterPro: IPR011083.
  
     0.671
ivy
Inhibitor of vertebrate lysozyme; Pfam: PF08816; InterPro: IPR014453.
  
     0.671
bcsE
Cellulose biosynthesis protein BcsE.
  
     0.581
gloA
Glyoxalase family protein; COG: COG0346; Pfam: PF00903; InterPro: IPR004360.
       0.563
flhE
Flagellar protein FlhE; Pfam: PF06366; InterPro: IPR009420.
  
     0.560
EFE95761.1
Hypothetical protein; COG: COG4519.
  
     0.513
fliT
Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.
  
     0.501
EFE96160.1
Antibiotic biosynthesis monooxygenase; Pfam: PF03992.
  
     0.486
EFE97637.1
Hypothetical protein; COG: COG4268.
  
     0.482
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.