STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BesAPutative esterase; COG: COG2819; Pfam: PF00756. (287 aa)    
Predicted Functional Partners:
entB
Isochorismatase; COG: COG1535; Pfam: PF00857,PF00550; InterPro: IPR000868.
 
    0.991
entF
AMP-binding enzyme; COG: COG1020; Pfam: PF00668,PF00501,PF00550,PF00975; InterPro: IPR010071.
 
  
 0.762
entE
(2,3-dihydroxybenzoyl)adenylate synthase; COG: COG1021; Pfam: PF00501; InterPro: IPR011963.
 
  
 0.724
fepA
TonB-dependent siderophore receptor; COG: COG4771; Pfam: PF07715,PF00593; InterPro: IPR010105.
 
  
 0.652
entC
Isochorismate synthase; COG: COG1169; Pfam: PF00425; InterPro: IPR004561.
 
    0.497
EFE95982.1
Hypothetical protein.
       0.452
mbtH
MbtH-like protein; COG: COG3251; Pfam: PF03621; InterPro: IPR005153.
  
    0.428
CirA
TonB-dependent receptor plug domain protein; COG: COG4771; Pfam: PF07715,PF00593; InterPro: IPR000531.
 
  
 0.402
fldA2
Flavodoxin; COG: COG0716; Pfam: PF00258; InterPro: IPR008254.
 
    0.401
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.