STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murQPutative N-acetylmuramic acid 6-phosphate etherase; COG: COG2103; Pfam: PF01380; overlaps another CDS with the same product name. (225 aa)    
Predicted Functional Partners:
EFE95828.1
Hypothetical protein; COG: COG2103; overlaps another CDS with the same product name; 4.2.-.-.
     0.980
nagA
N-acetylglucosamine-6-phosphate deacetylase; COG: COG1820; Pfam: PF01979; InterPro: IPR003764.
  
 0.978
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
   
 0.958
nagE
PTS system, N-acetylglucosamine-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367,PF00358; InterPro: IPR010974.
  
 
 0.950
crr
Glucose-specific phosphotransferase enzyme IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
    
 0.906
NagK
ROK family protein; COG: COG1940; Pfam: PF00480; InterPro: IPR000600.
    
 0.904
ybbF
Phosphotransferase system, EIIC; COG: COG1263; Pfam: PF00367,PF02378; InterPro: IPR003352.
 
  
 0.851
yfhH
Transcriptional regulator, RpiR family; COG: COG1737; Pfam: PF01418,PF01380; InterPro: IPR001347.
 
  
 0.848
EFE95274.1
BadF/BadG/BcrA/BcrD ATPase family protein; COG: COG2971; Pfam: PF01869; InterPro: IPR002731.
 
  
 0.740
yfhB
HAD hydrolase, family IF; COG: COG0560; InterPro: IPR006435.
       0.724
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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