STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppx-2Exopolyphosphatase; COG: COG0248; Pfam: PF02541; InterPro: IPR003695; Belongs to the GppA/Ppx family. (517 aa)    
Predicted Functional Partners:
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).
 
  
 0.961
ppk
Polyphosphate kinase; COG: COG0855; Pfam: PF02503; InterPro: IPR003414; overlaps another CDS with the same product name.
 
  
 0.959
pstA-2
Phosphate ABC transporter, permease protein PstA; COG: COG0581; Pfam: PF00528; InterPro: IPR005672.
     
 0.639
tehB
Tellurite resistance protein TehB; COG: COG0500; Pfam: PF03848; InterPro: IPR004537.
      0.581
pstC2
ABC transporter, permease protein; COG: COG4590; Pfam: PF00528.
     
 0.504
pstB-2
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.499
dsbC
Putative Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
    0.428
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.426
EFE94097.1
Putative ACR, COG1399; COG: COG1399; Pfam: PF02620; InterPro: IPR003772.
 
 
   0.407
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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