STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; COG: COG0837; Pfam: PF02685; InterPro: IPR003836; Belongs to the bacterial glucokinase family. (320 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.946
pgi
Glucose-6-phosphate isomerase; COG: COG0166; Pfam: PF00342; InterPro: IPR001672; Belongs to the GPI family.
    
 0.940
ptsG-2
PTS system, glucose-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR011299.
    
 0.922
ptsG
PTS system, glucose-like IIB component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR003352.
    
 0.920
malX
Phosphotransferase system, EIIC; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR003352.
    
 0.920
malX-2
PTS system maltose and glucose-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR011301.
    
 0.920
pgm
Phosphoglucomutase, alpha-D-glucose phosphate-specific; COG: COG0033; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR005852.
     
 0.920
galM
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
    
 0.911
crr
Glucose-specific phosphotransferase enzyme IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
     
 0.910
lacZ
Beta galactosidase small chain; COG: COG3250; Pfam: PF02837,PF00703,PF02836,PF02929; InterPro: IPR006103; Belongs to the glycosyl hydrolase 2 family.
     
 0.908
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.