STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scsDAntioxidant, AhpC/TSA family; COG: COG0526; Pfam: PF00578; InterPro: IPR012335. (166 aa)    
Predicted Functional Partners:
scsB
Cytochrome C biogenesis protein transmembrane region; Pfam: PF02683; InterPro: IPR012335.
 
 
 0.961
scsC
DsbA-like protein; Pfam: PF01323; InterPro: IPR012335.
 
 
 0.886
ahpC
Antioxidant, AhpC/TSA family; COG: COG0450; Pfam: PF00578; InterPro: IPR012335.
  
 0.821
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.781
ahp
Glutaredoxin-family domain protein; COG: COG0678; Pfam: PF08534,PF00462; InterPro: IPR012335.
 
 0.760
dsbD
Thioredoxin; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
  
 
 0.706
EFE95538.1
Hypothetical protein.
     
 0.694
EFE95074.1
Hypothetical protein.
   
 0.687
sseA
Rhodanese-like protein; COG: COG2897; Pfam: PF00581; InterPro: IPR001763.
    
 0.571
cyoA
Ubiquinol oxidase, subunit II; COG: COG1622; Pfam: PF00116,PF06481; InterPro: IPR006333.
    
 
 0.567
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.