STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgcAPhosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; COG: COG1762; Pfam: PF00359; InterPro: IPR002178. (147 aa)    
Predicted Functional Partners:
sgaB
PTS system, Lactose/Cellobiose specific IIB subunit; COG: COG3414; Pfam: PF02302; InterPro: IPR003501.
 
 
 0.991
sgaT
Putative sugar-specific permease, SgaT/UlaA; COG: COG3037; Pfam: PF04215; InterPro: IPR007333.
 
 
 0.991
UlaA_2
Putative sugar-specific permease, SgaT/UlaA; COG: COG3037; Pfam: PF04215; InterPro: IPR007333.
 
 
 0.984
EFE94612.1
Hypothetical protein.
  
 
 0.924
UlaC_2
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; COG: COG1762; Pfam: PF00359; InterPro: IPR002178.
 
  
 
0.919
ptsH
Phosphocarrier protein HPr; COG: COG1925; Pfam: PF00381; InterPro: IPR000032.
  
 
 0.908
mtlA
PTS system, mannitol-specific IIC component; COG: COG2213; Pfam: PF02378,PF02302,PF00359; InterPro: IPR004718.
 
  
0.787
fruA
Phosphotransferase system, EIIC; COG: COG1299; Pfam: PF02379,PF02378; InterPro: IPR006327.
 
  
 0.733
tktA
Transketolase, thiamine diphosphate binding domain protein; COG: COG3959; Pfam: PF00456; InterPro: IPR005474; overlaps another CDS with the same product name.
 
    0.652
pfkB
1-phosphofructokinase; COG: COG1105; Pfam: PF00294; InterPro: IPR011611; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.619
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.