STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntaAFMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; COG: COG2141; InterPro: IPR011251. (445 aa)    
Predicted Functional Partners:
ssuE
FMN reductase; COG: COG0431; Pfam: PF03358; InterPro: IPR005025.
 
 
 0.829
LuxA_1
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family; COG: COG2141; Pfam: PF00296; InterPro: IPR011251.
 
   
 0.825
SsuA_2
Hypothetical protein; COG: COG0715.
 
  
 0.729
ssuA2
ABC transporter, substrate-binding protein, aliphatic sulfonates family; COG: COG0715; Pfam: PF09084; InterPro: IPR010067.
 
  
 0.728
SsuA_1
ABC transporter, substrate-binding protein, aliphatic sulfonates family; COG: COG0715; Pfam: PF09084; InterPro: IPR010067.
 
  
 0.715
FliY_3
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Pfam: PF00497; InterPro: IPR001638.
 
    0.652
EFE95495.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
 
     0.630
ssuC
Putative aliphatic sulfonates transport permease protein SsuC; COG: COG0600; Pfam: PF00528; InterPro: IPR000515.
 
  
 0.598
EFE95376.1
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960; Pfam: PF02770,PF08028; InterPro: IPR013764.
 
  
 0.581
hpaC
4-hydroxyphenylacetate 3-monooxygenase, reductase component; COG: COG1853; Pfam: PF01613; InterPro: IPR002563.
 
  
 0.554
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.