STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbaClass II aldolase, tagatose bisphosphate family; COG: COG0191; Pfam: PF01116; InterPro: IPR013785. (290 aa)    
Predicted Functional Partners:
agaZ
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; COG: COG4573; Pfam: PF08013; InterPro: IPR012062.
  
 
 0.977
PfkA_2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
 
 
 0.944
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
 
 
 0.942
eda
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; COG: COG0800; Pfam: PF02581; InterPro: IPR013785.
    
 0.906
dgoA2
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; COG: COG0800; Pfam: PF01081; InterPro: IPR013785.
    
 0.906
agaS
Sugar isomerase, AgaS family; COG: COG2222; Pfam: PF01380.
 
  
 0.816
eda-2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; COG: COG0800; Pfam: PF01081; InterPro: IPR013785.
    
 0.815
eda-3
KHG/KDPG aldolase; COG: COG0800; Pfam: PF01081; InterPro: IPR013785.
    
 0.815
EFE95014.1
EF_0839/AHA_3917 family protein; Pfam: PF07071; InterPro: IPR010763.
     
  0.800
EFE95274.1
BadF/BadG/BcrA/BcrD ATPase family protein; COG: COG2971; Pfam: PF01869; InterPro: IPR002731.
       0.785
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.