STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agpHistidine acid phosphatase; Pfam: PF00328; InterPro: IPR000560. (409 aa)    
Predicted Functional Partners:
EFE95752.1
Hypothetical protein.
  
     0.631
yfhB
HAD hydrolase, family IF; COG: COG0560; InterPro: IPR006435.
  
     0.623
EFE94334.1
Fusaric acid resistance protein conserved region; COG: COG1289; Pfam: PF04632; InterPro: IPR006726.
  
     0.623
MliC
Putative Membrane-bound lysozyme inhibitor of C-type lysozyme; COG: COG3895.
  
     0.600
abrB
Putative membrane protein AbrB; COG: COG3180; Pfam: PF05145; InterPro: IPR007820.
  
     0.586
EFE95307.1
4'-phosphopantetheinyl transferase family protein; COG: COG2977; Pfam: PF01648; Belongs to the P-Pant transferase superfamily.
       0.566
rfaL
O-antigen ligase; Pfam: PF04932.
  
     0.557
EFE96176.1
Hypothetical protein.
  
     0.555
EFE96976.1
Hypothetical protein; COG: COG2091; Belongs to the P-Pant transferase superfamily.
  
     0.551
EFE96537.1
Hypothetical protein; COG: COG0524; Pfam: PF00294.
  
     0.524
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.