STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SsuD_1Luciferase-like monooxygenase; COG: COG2141; Pfam: PF00296; InterPro: IPR011251. (360 aa)    
Predicted Functional Partners:
SsuA_1
ABC transporter, substrate-binding protein, aliphatic sulfonates family; COG: COG0715; Pfam: PF09084; InterPro: IPR010067.
 
 
 0.994
SsuA_2
Hypothetical protein; COG: COG0715.
 
 
 0.986
ssuE
FMN reductase; COG: COG0431; Pfam: PF03358; InterPro: IPR005025.
 
 0.984
ssuA2
ABC transporter, substrate-binding protein, aliphatic sulfonates family; COG: COG0715; Pfam: PF09084; InterPro: IPR010067.
 
 
 0.979
ssuC
Putative aliphatic sulfonates transport permease protein SsuC; COG: COG0600; Pfam: PF00528; InterPro: IPR000515.
 
 
 0.976
ssuB
ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.971
tauD
Taurine dioxygenase; COG: COG2175; Pfam: PF02668; InterPro: IPR003819.
 
 
 0.948
ssuD
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 
 
0.921
EFE95376.1
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960; Pfam: PF02770,PF08028; InterPro: IPR013764.
 
  
 0.919
glpE
Rhodanese-like protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
  
 
  0.916
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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