STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgLFlagellar hook-associated protein 3; COG: COG1344; Pfam: PF00669; InterPro: IPR013384. (321 aa)    
Predicted Functional Partners:
flgK
Flagellar hook-associated protein FlgK; COG: COG1256; Pfam: PF00460,PF06429; InterPro: IPR002371.
 
 
 0.999
fliS
Flagellar protein FliS; COG: COG1516; Pfam: PF02561; InterPro: IPR003713.
 
 
 0.998
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.998
fliC
Flagellin D3 domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.996
flgD
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.994
flgE
Flagellar hook-basal body protein; COG: COG1749; Pfam: PF00460,PF07559,PF06429; InterPro: IPR011491.
 
 
 0.994
flgC
Flagellar basal-body rod protein FlgC; COG: COG1558; Pfam: PF00460,PF06429; InterPro: IPR006299; Belongs to the flagella basal body rod proteins family.
 
  
 0.990
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.988
flgG
Flagellar basal-body rod protein FlgG; COG: COG4786; Pfam: PF00460,PF06429; InterPro: IPR012834; Belongs to the flagella basal body rod proteins family.
 
 
 0.988
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.988
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.