STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliJFlagellar export protein FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. (148 aa)    
Predicted Functional Partners:
fliK
Flagellar hook-length control protein; COG: COG3144; Pfam: PF02120; InterPro: IPR001635.
 
  
 0.995
fliI
Flagellar protein export ATPase FliI; COG: COG1157; Pfam: PF00006; InterPro: IPR005714.
  
 
 0.994
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.991
fliH
Flagellar assembly protein FliH; COG: COG1317; Pfam: PF02108; InterPro: IPR000563.
 
  
 0.991
fliO
Flagellar biosynthetic protein FliO; Pfam: PF04347; InterPro: IPR007442.
 
  
 0.988
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.987
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.983
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.971
fliE
Flagellar hook-basal body complex protein FliE; COG: COG1677; Pfam: PF02049; InterPro: IPR001624.
 
  
 0.968
flgJ
Flagellar rod assembly protein/muramidase FlgJ; COG: COG1705; Pfam: PF01832; InterPro: IPR013377.
 
  
 0.958
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.