Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| birA | mutT4 | HMPREF0758_1652 | HMPREF0758_3331 | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | 0.550 |
| birA | pabB | HMPREF0758_1652 | HMPREF0758_3332 | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Aminodeoxychorismate synthase, component I; COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801. | 0.465 |
| mutT4 | birA | HMPREF0758_3331 | HMPREF0758_1652 | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.550 |
| mutT4 | pabB | HMPREF0758_3331 | HMPREF0758_3332 | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | Aminodeoxychorismate synthase, component I; COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801. | 0.794 |
| mutT4 | pcaF | HMPREF0758_3331 | HMPREF0758_3090 | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | Beta-ketoadipyl CoA thiolase; COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR012793; Belongs to the thiolase-like superfamily. Thiolase family. | 0.415 |
| mutT4 | rnr | HMPREF0758_3331 | HMPREF0758_0857 | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.487 |
| pabB | birA | HMPREF0758_3332 | HMPREF0758_1652 | Aminodeoxychorismate synthase, component I; COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801. | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.465 |
| pabB | mutT4 | HMPREF0758_3332 | HMPREF0758_3331 | Aminodeoxychorismate synthase, component I; COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801. | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | 0.794 |
| pcaF | mutT4 | HMPREF0758_3090 | HMPREF0758_3331 | Beta-ketoadipyl CoA thiolase; COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR012793; Belongs to the thiolase-like superfamily. Thiolase family. | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | 0.415 |
| rnr | mutT4 | HMPREF0758_0857 | HMPREF0758_3331 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | Hydrolase, NUDIX family; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. | 0.487 |