Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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rbsC4Branched-chain amino acid ABC transporter, permease protein; COG: COG1172; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family. (354 aa)    
Predicted Functional Partners:
rbsA4
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
 
 0.993
rbsB3
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
 
 0.990
rbsB-2
D-ribose-binding periplasmic protein; COG: COG1879; Pfam: PF00532.
 
 0.891
mglA3
ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.866
rbsA-2
Ribose transport ATP-binding protein rbsa; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.857
AlsB
Hypothetical protein; COG: COG1879.
 
 
 0.852
MglB_1
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
 
 
 0.851
rbsB
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
 
 
 0.850
MglB_2
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
 
 
 0.846
rbsA3
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
 
 
 0.837
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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