STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AdhB_2COG: COG1529; Pfam: PF02738,PF00034; InterPro: IPR008274. (1187 aa)    
Predicted Functional Partners:
iorA2
2Fe-2S iron-sulfur cluster-binding domain protein; COG: COG2080; Pfam: PF00111,PF01799; InterPro: IPR012675.
 0.997
nahG
FAD binding domain protein; COG: COG0654; Pfam: PF01494.
 
 
 0.956
iorA
2Fe-2S iron-sulfur cluster-binding domain protein; COG: COG2080; Pfam: PF00111,PF01799; InterPro: IPR002888.
 
 0.911
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.907
xdhB
Xanthine dehydrogenase, molybdopterin binding subunit; COG: COG4631; Pfam: PF01315,PF02738; InterPro: IPR014309; overlaps another CDS with the same product name.
  
  
 
0.906
pncA2
Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868.
    
  0.903
deoD
Purine nucleoside phosphorylase; COG: COG0813; Pfam: PF01048; InterPro: IPR000845.
     
  0.900
HcrC_1
2Fe-2S iron-sulfur cluster-binding domain protein; COG: COG2080; Pfam: PF00111,PF01799; InterPro: IPR002888.
 
 
 0.889
cyoC
Cytochrome o ubiquinol oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298.
  
 
 0.864
EFE94570.1
Hypothetical protein.
 
  
 0.856
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.