STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE94572.1Hydrolase, alpha/beta domain protein; Pfam: PF00561; InterPro: IPR000073. (264 aa)    
Predicted Functional Partners:
EFE94574.1
Isochorismatase family protein; Pfam: PF00857; InterPro: IPR000868.
 
 0.987
EFE94570.1
Hypothetical protein.
 
  
 0.983
maiA
Asp/Glu/Hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
   
 0.931
nahG
FAD binding domain protein; COG: COG0654; Pfam: PF01494.
 
  
 0.899
MarR_2
Transcriptional regulator, MarR family; COG: COG1846; Pfam: PF01047; InterPro: IPR011991.
 
     0.686
RhmT_6
Transporter, major facilitator family protein; COG: COG0477; Pfam: PF07690; InterPro: IPR011701.
 
     0.554
AdhB_2
COG: COG1529; Pfam: PF02738,PF00034; InterPro: IPR008274.
 
   
 0.509
acoC
Hydrolase, alpha/beta domain protein; Pfam: PF00561; InterPro: IPR000073.
  
     0.433
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.421
EFE93950.1
Phage tail tape measure protein, TP901 family; COG: COG5281; InterPro: IPR010090.
  
 
   0.416
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.