STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE94618.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EFE94700.1
Hypothetical protein.
  
     0.762
UlaC_2
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; COG: COG1762; Pfam: PF00359; InterPro: IPR002178.
       0.564
EFE94615.1
Hypothetical protein.
       0.558
PfkA_2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
 
     0.478
phyM
Histidine acid phosphatase; Pfam: PF00328; InterPro: IPR000560.
  
     0.469
yjjM
FCD domain protein; COG: COG1802; Pfam: PF00392,PF07729.
  
     0.465
EFE94355.1
Hypothetical protein.
  
     0.462
UlaA_2
Putative sugar-specific permease, SgaT/UlaA; COG: COG3037; Pfam: PF04215; InterPro: IPR007333.
       0.435
EFE98054.1
Hypothetical protein.
  
     0.432
EFE94612.1
Hypothetical protein.
       0.428
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.