STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FhaB_5Filamentous hemeagglutinin family domain protein; COG: COG3210; Pfam: PF05860,PF05594; InterPro: IPR012334. (2905 aa)    
Predicted Functional Partners:
fhaC2
POTRA domain protein, ShlB-type; COG: COG2831; Pfam: PF08479,PF03865; InterPro: IPR013686.
 
 
 0.892
hecB
POTRA domain protein, ShlB-type; COG: COG2831; Pfam: PF08479,PF03865; InterPro: IPR005565.
 
 
 0.823
fhaC
POTRA domain protein, ShlB-type; COG: COG2831; Pfam: PF08479,PF03865; InterPro: IPR005565.
 
 
 0.822
fliO
Flagellar biosynthetic protein FliO; Pfam: PF04347; InterPro: IPR007442.
  
   
 0.528
EFE93694.1
PAP2 family protein; Pfam: PF01569; InterPro: IPR000326.
  
     0.459
EFE96330.1
SMP-30/Gluconolaconase/LRE-like region; COG: COG3386; Pfam: PF08450; InterPro: IPR013658.
  
     0.406
QseG
Hypothetical protein.
  
     0.403
flgN
FlgN protein; COG: COG3418; Pfam: PF05130; InterPro: IPR007809.
  
     0.400
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.