STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MliCPutative Membrane-bound lysozyme inhibitor of C-type lysozyme; COG: COG3895. (100 aa)    
Predicted Functional Partners:
EFE94334.1
Fusaric acid resistance protein conserved region; COG: COG1289; Pfam: PF04632; InterPro: IPR006726.
  
     0.765
EFE96976.1
Hypothetical protein; COG: COG2091; Belongs to the P-Pant transferase superfamily.
  
     0.762
YdgH_1
Hypothetical protein; Pfam: PF07338; InterPro: IPR010854.
  
     0.761
cnu
OriC-binding nucleoid-associated protein; Pfam: PF05321; InterPro: IPR007985.
  
     0.748
YdgH_2
Hypothetical protein; Pfam: PF07338; InterPro: IPR010854.
  
     0.746
YfgJ
Hypothetical protein; Pfam: PF07191; InterPro: IPR010807.
  
     0.730
wzzE
Chain length determinant protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.718
ybgE
Cyd operon protein YbgE; COG: COG3790; InterPro: IPR011846.
  
     0.713
EFE95445.1
Hypothetical protein.
  
     0.712
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.704
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.