STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cscASucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (480 aa)    
Predicted Functional Partners:
scrA
PTS system sucrose-specific IIBC component; COG: COG1263; Pfam: PF00367,PF02378; InterPro: IPR010973.
 
 
 0.985
scrK-2
Fructokinase; COG: COG0524; Pfam: PF00294; InterPro: IPR011611; Belongs to the carbohydrate kinase PfkB family.
 
 0.957
lsc
Levansucrase/Invertase; Pfam: PF02435; InterPro: IPR003469; Belongs to the glycosyl hydrolase 68 family.
 
  
 0.932
melA2
Alpha-galactosidase; Pfam: PF02065; InterPro: IPR013785.
    
 0.919
melA
Family 4 glycosyl hydrolase; COG: COG1486; Pfam: PF02056; InterPro: IPR001088.
  
  
 0.918
bglH
Glycosyl hydrolase, family 1; COG: COG2723; Pfam: PF00232; InterPro: IPR001360; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.917
ascB
Glycosyl hydrolase, family 1; COG: COG2723; Pfam: PF00232; InterPro: IPR001360; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.916
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 
0.916
mak
ROK family protein; COG: COG1940; Pfam: PF00480; InterPro: IPR000600.
  
 
 0.913
malZ
Alpha amylase, catalytic domain protein; COG: COG0366; Pfam: PF00128; InterPro: IPR013781; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.909
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.