STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DapBeta-lactamase; COG: COG1680; Pfam: PF00144; InterPro: IPR001466. (512 aa)    
Predicted Functional Partners:
entF
AMP-binding enzyme; COG: COG1020; Pfam: PF00668,PF00501,PF00550,PF00975; InterPro: IPR010071.
 
  
 0.501
estB2
Beta-lactamase; COG: COG1680; Pfam: PF00144; InterPro: IPR001466.
  
     0.449
AmpC_4
Beta-lactamase; COG: COG1680; Pfam: PF00144; InterPro: IPR001466.
  
     0.426
hutC
Histidine utilization repressor; COG: COG2188; Pfam: PF00392,PF07702; InterPro: IPR010248.
       0.405
hutI
Imidazolonepropionase; COG: COG1228; Pfam: PF01979; InterPro: IPR005920.
  
    0.401
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.