STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93984.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
EFE93983.1
Hypothetical protein; Pfam: PF02413; InterPro: IPR003458.
  
  
 0.808
EFE93985.1
Hypothetical protein.
       0.786
EFE93986.1
Hypothetical protein.
       0.786
EFE93988.1
Hypothetical protein.
       0.784
EFE93987.1
Hypothetical protein.
       0.782
EFE93989.1
Hypothetical protein.
       0.782
EFE93991.1
Hypothetical protein.
       0.779
MltD_3
Transglycosylase SLT domain protein; COG: COG0741; Pfam: PF01464; InterPro: IPR008258.
  
    0.779
EFE93990.1
Hypothetical protein.
       0.775
EFE93982.1
Hypothetical protein; Pfam: PF02413.
       0.773
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.