STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93993.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EFE93982.1
Hypothetical protein; Pfam: PF02413.
       0.773
EFE93983.1
Hypothetical protein; Pfam: PF02413; InterPro: IPR003458.
       0.773
EFE93984.1
Hypothetical protein.
       0.773
EFE93985.1
Hypothetical protein.
       0.773
EFE93986.1
Hypothetical protein.
       0.773
EFE93987.1
Hypothetical protein.
       0.773
EFE93988.1
Hypothetical protein.
       0.773
EFE93989.1
Hypothetical protein.
       0.773
EFE93990.1
Hypothetical protein.
       0.773
EFE93991.1
Hypothetical protein.
       0.773
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.