STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93997.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
EFE93996.1
Hypothetical protein.
       0.794
EFE93998.1
Hypothetical protein.
       0.794
EFE93995.1
Hypothetical protein.
       0.793
EFE93999.1
Hypothetical protein.
       0.793
EFE93994.1
Hypothetical protein.
       0.791
EFE94000.1
Hypothetical protein.
       0.773
EFE94003.1
Hypothetical protein.
       0.765
EFE94005.1
Hypothetical protein.
       0.765
EFE94006.1
Phage protein F-like protein; COG: COG2369; Pfam: PF04233.
       0.765
EFE94001.1
Hypothetical protein.
       0.761
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.