STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE94007.1Putative phage-associated protein, HI1409 family. (516 aa)    
Predicted Functional Partners:
EFE94006.1
Phage protein F-like protein; COG: COG2369; Pfam: PF04233.
 
   
 0.935
EFE94008.1
Phage terminase, large subunit, PBSX family; Pfam: PF04466; InterPro: IPR006701.
 
   
 0.934
EFE94005.1
Hypothetical protein.
 
     0.929
EFE93996.1
Hypothetical protein.
 
     0.922
EFE93986.1
Hypothetical protein.
 
     0.896
EFE93988.1
Hypothetical protein.
 
     0.893
EFE93985.1
Hypothetical protein.
 
   
 0.892
EFE94009.1
Hypothetical protein.
 
     0.870
EFE94001.1
Hypothetical protein.
       0.698
EFE94004.1
Hypothetical protein.
       0.697
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.