STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE94026.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
dnaC
IstB-like ATP-binding protein; COG: COG1484; Pfam: PF01695.
       0.746
DnaT
Hypothetical protein.
       0.716
EFE94029.1
Hypothetical protein; 3.4.21.-.
       0.716
EFE94030.1
Hypothetical protein; Pfam: PF06254; InterPro: IPR009364.
       0.687
EFE94031.1
Hypothetical protein.
       0.682
EFE94023.1
Hypothetical protein.
       0.610
EFE94024.1
Hypothetical protein.
       0.610
EFE94025.1
Hypothetical protein; Pfam: PF07789.
       0.610
EFE94032.1
Hypothetical protein.
       0.484
EFE94022.1
Hypothetical protein.
       0.414
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.