STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaCIstB-like ATP-binding protein; COG: COG1484; Pfam: PF01695. (246 aa)    
Predicted Functional Partners:
DnaT
Hypothetical protein.
  
  
 0.792
EFE94026.1
Hypothetical protein.
       0.746
EFE94029.1
Hypothetical protein; 3.4.21.-.
       0.741
dnaB
Replicative DNA helicase; COG: COG0305; Pfam: PF00772,PF03796; InterPro: IPR007694.
  
 
 0.723
dnaB-2
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.723
EFE94030.1
Hypothetical protein; Pfam: PF06254; InterPro: IPR009364.
       0.711
EFE94031.1
Hypothetical protein.
       0.706
EFE94024.1
Hypothetical protein.
 
     0.651
EFE94023.1
Hypothetical protein.
       0.599
EFE94025.1
Hypothetical protein; Pfam: PF07789.
       0.590
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.