STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsACDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (182 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
 
  
 0.955
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
 
  
 0.948
pgpB-2
Phosphatidylglycerophosphatase B; COG: COG0671; Pfam: PF01569; InterPro: IPR000326.
  
 
 0.923
pssA
Phospholipase D domain protein; COG: COG1502; Pfam: PF00614.
  
 
 0.921
yfhB
HAD hydrolase, family IF; COG: COG0560; InterPro: IPR006435.
  
 
 0.910
cdh
CDP-diacylglycerol diphosphatase; COG: COG2134; Pfam: PF02611; InterPro: IPR003763.
     
  0.900
rodZ
DNA-binding helix-turn-helix protein; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.
  
    0.800
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.688
cinA2
Competence/damage-inducible domain protein CinA; COG: COG1058; Pfam: PF00994; InterPro: IPR008135; Belongs to the CinA family.
  
  
 0.625
uvrY
Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789.
  
  
 0.619
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.