STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsG3Phosphotransferase system, EIIB; COG: COG1264; Pfam: PF00367; InterPro: IPR001996. (106 aa)    
Predicted Functional Partners:
nagE
PTS system, N-acetylglucosamine-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367,PF00358; InterPro: IPR010974.
 
 
 0.843
crr
Glucose-specific phosphotransferase enzyme IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
 
 
 0.821
malX-2
PTS system maltose and glucose-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR011301.
  
    0.775
pbg
Beta-galactosidase trimerization domain protein; COG: COG1874; Pfam: PF02449,PF08532,PF08533; InterPro: IPR013781.
 
     0.675
arbF
PTS system, beta-glucoside-specific, IIABC component; COG: COG1263; Pfam: PF00367,PF02378,PF00358; InterPro: IPR011297.
 
 
 0.604
ptsP
Phosphoenolpyruvate-protein phosphotransferase; COG: COG1080; Pfam: PF00381,PF05524,PF00391,PF02896,PF00359; InterPro: IPR006318.
 
  
 0.518
galA
Glycosyl hydrolase, family 53; COG: COG3867; Pfam: PF07745; InterPro: IPR013781.
       0.510
malD
ABC transporter, permease protein; COG: COG3833; Pfam: PF00528; InterPro: IPR000515.
  
  
 0.506
dhaM
Dihydroxyacetone kinase, phosphotransfer subunit; COG: COG3412; Pfam: PF03610,PF00381,PF05524,PF00391; InterPro: IPR012844; Belongs to the PEP-utilizing enzyme family.
 
  
 0.492
malC
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
  
  
 0.492
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.