STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93951.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
EFE93953.1
Hypothetical protein.
       0.787
EFE93952.1
Hypothetical protein.
       0.773
EFE93955.1
Hypothetical protein.
       0.685
EFE93956.1
Putative phage head-tail adaptor.
       0.682
EFE93954.1
Phage protein, HK97 gp10 family; Pfam: PF07772; InterPro: IPR010064.
       0.679
EFE93957.1
Putative phage DNA packaging protein.
       0.668
EFE93958.1
Hypothetical protein.
       0.668
EFE93959.1
Phage major capsid protein, HK97 family; InterPro: IPR006444.
       0.668
clpP-3
Endopeptidase Clp; COG: COG0740; Pfam: PF00574; InterPro: IPR001907; Belongs to the peptidase S14 family.
       0.654
vtaK2
NlpC/P60 family protein; COG: COG1310; Pfam: PF00877; InterPro: IPR000555.
       0.556
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.