STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93579.1Hypothetical protein; COG: COG3593. (552 aa)    
Predicted Functional Partners:
hsdM
N-6 DNA Methylase; COG: COG0286; Pfam: PF02384; InterPro: IPR003356.
  
  
 0.712
hsdS
Type I restriction modification DNA specificity domain protein; COG: COG0732; Pfam: PF01420; InterPro: IPR000055.
  
  
 0.672
EFE97443.1
Hypothetical protein.
  
  
 0.669
EFE94342.1
NAD dependent epimerase/dehydratase family protein; COG: COG2910; Pfam: PF01370; InterPro: IPR016040.
   
    0.652
klcA
Antirestriction protein; Pfam: PF03230; InterPro: IPR004914.
  
     0.609
EFE93580.1
Tat pathway signal sequence domain protein; COG: COG2431; Pfam: PF03956; InterPro: IPR005642.
     
 0.582
EFE94953.1
Hypothetical protein.
  
     0.572
EFE97474.1
Putative permease; COG: COG0701; Pfam: PF03773; InterPro: IPR005524.
   
    0.514
EFE97991.1
Hypothetical protein; COG: COG1073; Pfam: PF06500; InterPro: IPR010520; 3.1.-.-; Belongs to the UPF0255 family.
  
     0.502
EFE94040.1
Bacteriophage lambda integrase domain protein; COG: COG0582; Pfam: PF09003,PF00589; InterPro: IPR013762; Belongs to the 'phage' integrase family.
  
     0.490
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.