node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YeeZ | rpsB | HMPREF0758_4532 | HMPREF0758_2329 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | 0.475 |
YeeZ | rpsC | HMPREF0758_4532 | HMPREF0758_0955 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.509 |
YeeZ | rpsE | HMPREF0758_4532 | HMPREF0758_0944 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.498 |
YeeZ | rpsH | HMPREF0758_4532 | HMPREF0758_0947 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.494 |
YeeZ | rpsJ | HMPREF0758_4532 | HMPREF0758_0962 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.492 |
YeeZ | rpsK | HMPREF0758_4532 | HMPREF0758_0939 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.471 |
YeeZ | rpsN | HMPREF0758_4532 | HMPREF0758_0948 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.538 |
YeeZ | rpsQ | HMPREF0758_4532 | HMPREF0758_0952 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.514 |
YeeZ | rpsS | HMPREF0758_4532 | HMPREF0758_0957 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.538 |
YeeZ | wbaP | HMPREF0758_4532 | HMPREF0758_3603 | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | Undecaprenyl-phosphate galactose phosphotransferase, WbaP; COG: COG2148; Pfam: PF02397; InterPro: IPR003362. | 0.474 |
rpsB | YeeZ | HMPREF0758_2329 | HMPREF0758_4532 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | 0.475 |
rpsB | rpsC | HMPREF0758_2329 | HMPREF0758_0955 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rpsB | rpsE | HMPREF0758_2329 | HMPREF0758_0944 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rpsB | rpsH | HMPREF0758_2329 | HMPREF0758_0947 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rpsB | rpsJ | HMPREF0758_2329 | HMPREF0758_0962 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rpsB | rpsK | HMPREF0758_2329 | HMPREF0758_0939 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
rpsB | rpsN | HMPREF0758_2329 | HMPREF0758_0948 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.998 |
rpsB | rpsQ | HMPREF0758_2329 | HMPREF0758_0952 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpsB | rpsS | HMPREF0758_2329 | HMPREF0758_0957 | Ribosomal protein S2; COG: COG0052; Pfam: PF00318; InterPro: IPR005706; Belongs to the universal ribosomal protein uS2 family. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.998 |
rpsC | YeeZ | HMPREF0758_0955 | HMPREF0758_4532 | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF03446; InterPro: IPR016040. | 0.509 |