STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fghAS-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (280 aa)    
Predicted Functional Partners:
adhC
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; COG: COG1062; Pfam: PF08240,PF00107; InterPro: IPR014183; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
XylB_3
Oxidoreductase, zinc-binding dehydrogenase family protein; COG: COG1062; Pfam: PF00107; InterPro: IPR002085.
 
 
 0.918
fdxH
Formate dehydrogenase, beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
     
  0.900
fdnI
Formate dehydrogenase, gamma subunit; COG: COG2864; Pfam: PF01292; InterPro: IPR006471.
     
  0.900
FrmR
Hypothetical protein; COG: COG1937; Pfam: PF02583; InterPro: IPR003735.
  
  
 0.657
lysR9
LysR substrate binding domain protein; COG: COG0583; Pfam: PF00126,PF03466; InterPro: IPR005119; Belongs to the LysR transcriptional regulatory family.
       0.636
fdh
GroES-like protein; COG: COG1063; Pfam: PF08240,PF00107; InterPro: IPR002085.
  
 
 0.575
gst6
Glutathione S-transferase, C-terminal domain protein; COG: COG0625; Pfam: PF02798,PF00043; InterPro: IPR010987; Belongs to the GST superfamily.
  
    0.572
EFE93711.1
Hypothetical protein; Pfam: PF06779; InterPro: IPR010645.
     
 0.486
yfcE
Phosphodiesterase family protein; COG: COG0622; Pfam: PF00149; InterPro: IPR000979.
  
  
 0.458
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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