STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93751.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
EFE93753.1
Putative phage prohead protease, HK97 family.
  
 
 0.887
EFE93752.1
Hypothetical protein.
     
 0.825
matC
Putative protein MatC.
  
  
0.585
matB
Fimbrillin MatB.
  
  
 0.553
EFE95360.1
Hypothetical protein.
  
 
 0.524
papC
Fimbrial usher protein; COG: COG3188; Pfam: PF00577; InterPro: IPR000015.
  
 
 0.431
psaC
Fimbrial usher protein; COG: COG3188; Pfam: PF00577; InterPro: IPR000015.
  
 
 0.431
fimD
Fimbrial usher protein; COG: COG3188; Pfam: PF00577; InterPro: IPR000015.
  
 
 0.431
fimD2
Fimbrial usher protein; COG: COG3188; Pfam: PF00577; InterPro: IPR000015.
  
 
 0.431
bcfC
Fimbrial usher protein; COG: COG3188; Pfam: PF00577; InterPro: IPR000015.
  
 
 0.431
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.