STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KefF_2Flavodoxin-like protein; COG: COG2249; Pfam: PF02525; InterPro: IPR003680. (201 aa)    
Predicted Functional Partners:
wrbA
NAD(P)H:quinone oxidoreductase, type IV; COG: COG0655; Pfam: PF00258; InterPro: IPR010089.
    
 0.919
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
kefC
Transporter, CPA2 family; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
 
 
 0.794
kefB
Transporter, CPA2 family; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
 
 
 0.788
EFE93785.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR001647.
 
     0.771
kefG
Flavodoxin-like protein; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.
  
     0.678
EFE93783.1
Hypothetical protein.
       0.563
EFE93782.1
Glycosyl transferase family, helical bundle domain protein; COG: COG0547; Pfam: PF02885; InterPro: IPR000312.
       0.490
lysA
Diaminopimelate decarboxylase; COG: COG0019; Pfam: PF02784,PF00278; InterPro: IPR002986.
    
  0.443
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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