STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (383 aa)    
Predicted Functional Partners:
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG1085; Pfam: PF01087,PF02744; InterPro: IPR001937; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
 0.999
galM
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
 
 0.996
galE
UDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.970
lacZ
Beta galactosidase small chain; COG: COG3250; Pfam: PF02837,PF00703,PF02836,PF02929; InterPro: IPR006103; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.759
EFE93769.1
Hypothetical protein.
  
 
 0.691
pbg
Beta-galactosidase trimerization domain protein; COG: COG1874; Pfam: PF02449,PF08532,PF08533; InterPro: IPR013781.
 
  
 0.523
rfbB
dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.485
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.477
EFE93930.1
CAAX amino terminal protease family protein; COG: COG1266; Pfam: PF02517; InterPro: IPR003675.
 
     0.477
melA2
Alpha-galactosidase; Pfam: PF02065; InterPro: IPR013785.
 
  
 0.473
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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