STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galMGalactose mutarotase; Converts alpha-aldose to the beta-anomer. (347 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.996
lacZ
Beta galactosidase small chain; COG: COG3250; Pfam: PF02837,PF00703,PF02836,PF02929; InterPro: IPR006103; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.940
melA2
Alpha-galactosidase; Pfam: PF02065; InterPro: IPR013785.
 
 
  0.929
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG1085; Pfam: PF01087,PF02744; InterPro: IPR001937; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
 
 
 0.925
YihX
HAD hydrolase, family IA, variant 3; COG: COG1011; Pfam: PF00702; InterPro: IPR005834.
  
 
  0.918
pbg
Beta-galactosidase trimerization domain protein; COG: COG1874; Pfam: PF02449,PF08532,PF08533; InterPro: IPR013781.
  
 
 0.918
glk
Glucokinase; COG: COG0837; Pfam: PF02685; InterPro: IPR003836; Belongs to the bacterial glucokinase family.
    
 0.911
melA
Family 4 glycosyl hydrolase; COG: COG1486; Pfam: PF02056; InterPro: IPR001088.
     
  0.900
galE
UDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.699
xylA
Xylose isomerase; COG: COG2115; Pfam: PF01261; InterPro: IPR013022; Belongs to the xylose isomerase family.
 
  
 0.493
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.