STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93493.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EFE97101.1
Phage P2 GpU; COG: COG3499; Pfam: PF06995; InterPro: IPR009734.
  
  
 0.835
EFE97104.1
Phage tail protein I; COG: COG4385; InterPro: IPR006521.
  
  
 0.833
gpj
Baseplate J-like protein; COG: COG3948; Pfam: PF04865; InterPro: IPR006949.
  
  
 0.832
EFE97114.1
Phage Tail Protein X; Pfam: PF05489; InterPro: IPR008861.
  
    0.803
EFE93494.1
Hypothetical protein.
  
    0.794
EFE93495.1
Hypothetical protein; Pfam: PF04865.
  
    0.790
EFE97107.1
Phage-related baseplate assembly protein; COG: COG4540; Pfam: PF04717; InterPro: IPR013046.
  
  
 0.781
EFE98324.1
Phage prohead protease, HK97 family; COG: COG3740; Pfam: PF04586; InterPro: IPR006433.
  
    0.776
fii
Phage major tail tube protein; COG: COG3498; Pfam: PF04985; InterPro: IPR006498.
  
  
 0.734
EFE97096.1
Phage late control gene D protein (GPD); COG: COG3500; Pfam: PF05954; InterPro: IPR010277.
  
  
 0.712
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.