STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93494.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
EFE93495.1
Hypothetical protein; Pfam: PF04865.
 
    0.950
EFE98319.1
Bacteriophage Mu tail sheath protein (GpL); COG: COG4386; Pfam: PF06274; InterPro: IPR009375.
 
  
 0.831
EFE98312.1
Phage protein GP46; Pfam: PF07409; InterPro: IPR010877.
 
    0.805
EFE98315.1
DNA circulation, N-terminal domain protein; Pfam: PF07157; InterPro: IPR009826.
 
    0.804
EFE98313.1
Bacteriophage Mu Gp45 protein; COG: COG4384; Pfam: PF06890; InterPro: IPR013046.
 
    0.800
EFE98314.1
Bacteriophage Mu P protein; COG: COG4379; Pfam: PF06893; InterPro: IPR010689.
 
    0.799
EFE98311.1
Hypothetical protein; Pfam: PF04865; InterPro: IPR006949.
 
    0.795
EFE93493.1
Hypothetical protein.
  
    0.794
ivy
Inhibitor of vertebrate lysozyme; Pfam: PF08816; InterPro: IPR014453.
  
     0.675
EFE93984.1
Hypothetical protein.
  
  
 0.601
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.