STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93430.1Integrase core domain protein; COG: COG2801; Pfam: PF00665; InterPro: IPR001584. (273 aa)    
Predicted Functional Partners:
EFE93431.1
Transposase; COG: COG2963; Pfam: PF01527; InterPro: IPR002514.
 
  
 0.942
EFE96272.1
Putative insertion sequence 2 OrfA protein; COG: COG2963; Pfam: PF01527.
 
  
 0.794
EFE93280.1
Transposase; COG: COG2963; Pfam: PF01527; InterPro: IPR002514.
 
  
 0.794
EFE96273.1
Hypothetical protein; COG: COG2963; Pfam: PF01527.
 
  
 0.788
EFE97635.1
Integrase core domain protein; COG: COG2801; Pfam: PF00665; InterPro: IPR001584.
 
   
 0.662
EFE93397.1
Transposase; COG: COG2801; Pfam: PF01527; InterPro: IPR002514.
  
     0.585
EFE96864.1
Transposase; COG: COG2801; Pfam: PF01527; InterPro: IPR002514.
  
     0.576
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.