STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
revTReverse transcriptase (RNA-dependent DNA polymerase); COG: COG3344; Pfam: PF00078,PF08388; InterPro: IPR000477. (416 aa)    
Predicted Functional Partners:
istB
IstB-like ATP-binding protein; COG: COG1484; Pfam: PF08483,PF01695; InterPro: IPR002611.
  
     0.612
DnaC_1
IstB-like ATP-binding protein; COG: COG1484; Pfam: PF01695; InterPro: IPR002611.
  
     0.569
EFE93416.1
Integrase core domain protein; COG: COG4584; Pfam: PF02796,PF00665; InterPro: IPR001584.
 
     0.403
EFE93262.1
SNF2 family N-terminal domain protein; COG: COG0553; Pfam: PF00176,PF00271; InterPro: IPR000330.
 
     0.402
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.