STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB72658.1Hypothetical protein; S4JAPL_C00005G00037; S4JAPL_17433G0037. (119 aa)    
Predicted Functional Partners:
EQB72659.1
Hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.
     0.764
EQB72660.1
Hypothetical protein; S4JAPL_C00005G00039; S4JAPL_17433G0039.
 
     0.607
EQB72369.1
Hypothetical protein; S4JAPL_C00009G00007; S4JAPL_17387G0007.
  
     0.484
csl4
Hypothetical protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.
 
     0.477
rps27ae
Hypothetical protein; S4JAPL_C00052G00013; S4JAPL_17452G0013; Belongs to the eukaryotic ribosomal protein eS31 family.
  
    0.439
EQB70959.1
Hypothetical protein; S4JAPL_C00043G00025; S4JAPL_17306G0025.
  
     0.435
mptD
Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD).
  
     0.434
EQB69998.1
Hypothetical protein; S4JAPL_C00082G00009; S4JAPL_17300G0009.
  
     0.434
EQB66358.1
Hypothetical protein; S4JAPL_C00108G00006; S4JAPL_00004G0006; Belongs to the UPF0179 family.
  
     0.424
EQB72661.1
Hypothetical protein; S4JAPL_C00005G00040; S4JAPL_17433G0040.
       0.411
Your Current Organism:
Thermoplasmatales archaeon Aplasma
NCBI taxonomy Id: 667135
Other names: T. archaeon A-plasma, Thermoplasmatales archaeon A-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.