STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB72262.1Type II secretion system F protein; S4JAPL_C00010G00021; S4JAPL_17298G0021; overlaps another CDS with the same product name. (274 aa)    
Predicted Functional Partners:
EQB72260.1
Hypothetical protein; S4JAPL_C00010G00019; S4JAPL_17298G0019.
 
  
 0.946
EQB72263.1
Hypothetical protein; S4JAPL_C00010G00022; S4JAPL_17298G0022.
 
  
 0.945
EQB72261.1
Type II secretion system F protein; S4JAPL_C00010G00020; S4JAPL_17298G0020; overlaps another CDS with the same product name.
 
     0.941
EQB72315.1
Hypothetical protein; S4JAPL_C00010G00074; S4JAPL_17298G0074.
 
  
 0.807
EQB72640.1
PRC-barrel protein; S4JAPL_C00005G00019; S4JAPL_17433G0019.
  
    0.741
EQB72314.1
Hypothetical protein; S4JAPL_C00010G00073; S4JAPL_17298G0073.
 
  
 0.731
EQB70268.1
Hypothetical protein; S4JAPL_C00064G00004; S4JAPL_13083G0004.
  
     0.704
EQB70141.1
Hypothetical protein; S4JAPL_C00073G00004; S4JAPL_00061G0004.
  
     0.666
EQB72377.1
ArsR family transcriptional regulator; S4JAPL_C00009G00015; S4JAPL_17387G0015.
  
     0.561
EQB72259.1
Hypothetical protein; S4JAPL_C00010G00018; S4JAPL_17298G0018.
       0.532
Your Current Organism:
Thermoplasmatales archaeon Aplasma
NCBI taxonomy Id: 667135
Other names: T. archaeon A-plasma, Thermoplasmatales archaeon A-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.