STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB67168.1IstB helper protein; UNLEPL_C00002G00004; UNLEPL_17965G0004. (130 aa)    
Predicted Functional Partners:
rpl40e
50S ribosomal protein L40E; UNLEPL_C00002G00197; UNLEPL_17965G0197; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.923
pcn
Hypothetical protein; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
  
 
 0.864
psmA
Hypothetical protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 0.752
psmB
Hypothetical protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
 0.751
EQB65142.1
Hypothetical protein; UNLEPL_C00004G00085; UNLEPL_15833G0085.
   
 0.738
EQB65143.1
Hypothetical protein; UNLEPL_C00004G00086; UNLEPL_15833G0086.
   
 0.738
EQB67690.1
Hypothetical protein; UNLEPL_C00002G00526; UNLEPL_17965G0526.
    
 0.715
EQB65052.1
Hypothetical protein; UNLEPL_C00005G00044; UNLEPL_15251G0044.
    
 0.715
EQB65791.1
Periplasmic copper-binding protein; UNLEPL_C00003G00808; UNLEPL_15243G0808.
   
 0.669
EQB67721.1
Hypothetical protein; UNLEPL_C00002G00557; UNLEPL_17965G0557.
   
  0.654
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.