STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrSHypothetical protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily. (330 aa)    
Predicted Functional Partners:
EQB67711.1
Hypothetical protein; UNLEPL_C00002G00547; UNLEPL_17965G0547; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.870
pheT
phenylalanyl-tRNA synthetase subunit beta; UNLEPL_C00002G00278; UNLEPL_17965G0278.
 
  
 0.854
EQB66539.1
Hypothetical protein; UNLEPL_C00003G00096; UNLEPL_15243G0096; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.835
EQB67044.1
Hypothetical protein; UNLEPL_C00003G00601; UNLEPL_15243G0601.
  
  
 0.825
EQB66736.1
Hypothetical protein; UNLEPL_C00003G00293; UNLEPL_15243G0293.
  
  
 0.820
truB
Hypothetical protein; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
 
 
 0.812
EQB66450.1
Hypothetical protein; UNLEPL_C00003G00007; UNLEPL_15243G0007; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.808
serS
Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
  
 0.774
EQB67431.1
Hypothetical protein; UNLEPL_C00002G00267; UNLEPL_17965G0267; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.770
EQB66942.1
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
  
 0.770
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.